WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42G8.3a.1 Sequence Name  F42G8.3a.1
Length (nt)  1537   Chromosome Location  IV: 8143500-8148648
Chromosome . Primary Identifier  IV Chromosome Location . Start  8143500
Chromosome Location . End  8148648 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42G8.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004056 pmk-2 F42G8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42G8.3a F42G8.3a 1209   IV: 8143511-8143615

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F42G8.3a.1 8143500 8148648 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon133012   116   IV: 8143500-8143615 Caenorhabditis elegans
Exon133014   86   IV: 8144213-8144298 Caenorhabditis elegans
Exon133016   189   IV: 8144348-8144536 Caenorhabditis elegans
Exon133018   112   IV: 8145042-8145153 Caenorhabditis elegans
Exon133020   78   IV: 8147053-8147130 Caenorhabditis elegans
Exon133022   115   IV: 8147182-8147296 Caenorhabditis elegans
Exon133026   72   IV: 8147625-8147696 Caenorhabditis elegans
Exon133030   97   IV: 8147746-8147842 Caenorhabditis elegans
Exon133036   205   IV: 8147927-8148131 Caenorhabditis elegans
Exon133040   467   IV: 8148182-8148648 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F42G8.3a.1 8143500 8148648 1

1 Sequence

Length
1537

1 Sequence Ontology Term

Identifier Name Description
transcript