WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y42H9AR.3a.1 Sequence Name  Y42H9AR.3a.1
Length (nt)  1893   Chromosome Location  IV: 8104284-8107602
Chromosome . Primary Identifier  IV Chromosome Location . Start  8104284
Chromosome Location . End  8107602 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y42H9AR.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021538 rabs-5 Y42H9AR.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y42H9AR.3a Y42H9AR.3a 1692   IV: 8104481-8104670

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y42H9AR.3a.1 8104284 8107602 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132881   387   IV: 8104284-8104670 Caenorhabditis elegans
Exon132883   423   IV: 8105164-8105586 Caenorhabditis elegans
Exon132885   415   IV: 8105637-8106051 Caenorhabditis elegans
Exon132887   162   IV: 8106141-8106302 Caenorhabditis elegans
Exon132889   247   IV: 8106676-8106922 Caenorhabditis elegans
Exon132891   198   IV: 8106968-8107165 Caenorhabditis elegans
Exon132894   61   IV: 8107542-8107602 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y42H9AR.3a.1 8104284 8107602 -1

1 Sequence

Length
1893

1 Sequence Ontology Term

Identifier Name Description
transcript