WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y42H9B.2.1 Sequence Name  Y42H9B.2.1
Length (nt)  7498   Chromosome Location  IV: 7991410-8004119
Chromosome . Primary Identifier  IV Chromosome Location . Start  7991410
Chromosome Location . End  8004119 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y42H9B.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004371 rig-4 Y42H9B.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y42H9B.2 Y42H9B.2 6978   IV: 7991855-7991985

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y42H9B.2.1 7991410 8004119 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132678   576   IV: 7991410-7991985 Caenorhabditis elegans
Exon132679   870   IV: 7992254-7993123 Caenorhabditis elegans
Exon132680   1801   IV: 7993738-7995538 Caenorhabditis elegans
Exon132681   564   IV: 7995982-7996545 Caenorhabditis elegans
Exon132682   1052   IV: 7996655-7997706 Caenorhabditis elegans
Exon132684   639   IV: 7997785-7998423 Caenorhabditis elegans
Exon132685   832   IV: 7999334-8000165 Caenorhabditis elegans
Exon132687   442   IV: 8001043-8001484 Caenorhabditis elegans
Exon132688   158   IV: 8001859-8002016 Caenorhabditis elegans
Exon132689   149   IV: 8002246-8002394 Caenorhabditis elegans
Exon132694   207   IV: 8003572-8003778 Caenorhabditis elegans
Exon132695   208   IV: 8003912-8004119 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y42H9B.2.1 7991410 8004119 -1

1 Sequence

Length
7498

1 Sequence Ontology Term

Identifier Name Description
transcript