WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F20D12.1a.2 Sequence Name  F20D12.1a.2
Length (nt)  3599   Chromosome Location  IV: 7957568-7962157
Chromosome . Primary Identifier  IV Chromosome Location . Start  7957568
Chromosome Location . End  7962157 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F20D12.1a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017641 csr-1 F20D12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F20D12.1a F20D12.1a 3093   IV: 7957580-7958054

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F20D12.1a.2 7957568 7962157 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132554   487   IV: 7957568-7958054 Caenorhabditis elegans
Exon132558   160   IV: 7958599-7958758 Caenorhabditis elegans
Exon132561   154   IV: 7958800-7958953 Caenorhabditis elegans
Exon132564   212   IV: 7958997-7959208 Caenorhabditis elegans
Exon132567   152   IV: 7959253-7959404 Caenorhabditis elegans
Exon132570   386   IV: 7959452-7959837 Caenorhabditis elegans
Exon132573   722   IV: 7959883-7960604 Caenorhabditis elegans
Exon132576   100   IV: 7960649-7960748 Caenorhabditis elegans
Exon132579   357   IV: 7960793-7961149 Caenorhabditis elegans
Exon132582   189   IV: 7961200-7961388 Caenorhabditis elegans
Exon132585   89   IV: 7961432-7961520 Caenorhabditis elegans
Exon132589   591   IV: 7961567-7962157 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F20D12.1a.2 7957568 7962157 1

1 Sequence

Length
3599

1 Sequence Ontology Term

Identifier Name Description
transcript