WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C49H3.5a.1 Sequence Name  C49H3.5a.1
Length (nt)  3354   Chromosome Location  IV: 7910600-7915184
Chromosome . Primary Identifier  IV Chromosome Location . Start  7910600
Chromosome Location . End  7915184 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49H3.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003827 ntl-4 C49H3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C49H3.5a C49H3.5a 2391   IV: 7910646-7910681

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C49H3.5a.1 7910600 7915184 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132374   82   IV: 7910600-7910681 Caenorhabditis elegans
Exon132376   69   IV: 7910746-7910814 Caenorhabditis elegans
Exon132381   96   IV: 7910957-7911052 Caenorhabditis elegans
Exon132386   321   IV: 7911108-7911428 Caenorhabditis elegans
Exon132393   108   IV: 7911532-7911639 Caenorhabditis elegans
Exon132395   173   IV: 7911690-7911862 Caenorhabditis elegans
Exon132400   65   IV: 7911908-7911972 Caenorhabditis elegans
Exon132405   68   IV: 7912024-7912091 Caenorhabditis elegans
Exon132410   179   IV: 7912142-7912320 Caenorhabditis elegans
Exon132415   453   IV: 7912375-7912827 Caenorhabditis elegans
Exon132422   283   IV: 7912875-7913157 Caenorhabditis elegans
Exon132426   1457   IV: 7913728-7915184 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C49H3.5a.1 7910600 7915184 1

1 Sequence

Length
3354

1 Sequence Ontology Term

Identifier Name Description
transcript