WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C49H3.5c.1 Sequence Name  C49H3.5c.1
Length (nt)  3355   Chromosome Location  IV: 7910593-7915184
Chromosome . Primary Identifier  IV Chromosome Location . Start  7910593
Chromosome Location . End  7915184 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49H3.5c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003827 ntl-4 C49H3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C49H3.5c C49H3.5c 2385   IV: 7910646-7910681

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C49H3.5c.1 7910593 7915184 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132372   89   IV: 7910593-7910681 Caenorhabditis elegans
Exon132377   69   IV: 7910746-7910814 Caenorhabditis elegans
Exon132382   96   IV: 7910957-7911052 Caenorhabditis elegans
Exon132387   321   IV: 7911108-7911428 Caenorhabditis elegans
Exon132391   102   IV: 7911532-7911633 Caenorhabditis elegans
Exon132396   173   IV: 7911690-7911862 Caenorhabditis elegans
Exon132401   65   IV: 7911908-7911972 Caenorhabditis elegans
Exon132406   68   IV: 7912024-7912091 Caenorhabditis elegans
Exon132411   179   IV: 7912142-7912320 Caenorhabditis elegans
Exon132416   453   IV: 7912375-7912827 Caenorhabditis elegans
Exon132423   283   IV: 7912875-7913157 Caenorhabditis elegans
Exon132427   1457   IV: 7913728-7915184 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C49H3.5c.1 7910593 7915184 1

1 Sequence

Length
3355

1 Sequence Ontology Term

Identifier Name Description
transcript