WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C49H3.6a.1 Sequence Name  C49H3.6a.1
Length (nt)  1914   Chromosome Location  IV: 7903740-7907095
Chromosome . Primary Identifier  IV Chromosome Location . Start  7903740
Chromosome Location . End  7907095 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49H3.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016792 cbpl-1 C49H3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C49H3.6a C49H3.6a 1659   IV: 7903777-7903830

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C49H3.6a.1 7903740 7907095 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132342   91   IV: 7903740-7903830 Caenorhabditis elegans
Exon132343   363   IV: 7904021-7904383 Caenorhabditis elegans
Exon132345   74   IV: 7904439-7904512 Caenorhabditis elegans
Exon132347   269   IV: 7904599-7904867 Caenorhabditis elegans
Exon132349   230   IV: 7904915-7905144 Caenorhabditis elegans
Exon132351   224   IV: 7905426-7905649 Caenorhabditis elegans
Exon132353   188   IV: 7905741-7905928 Caenorhabditis elegans
Exon132355   162   IV: 7906035-7906196 Caenorhabditis elegans
Exon132356   313   IV: 7906783-7907095 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C49H3.6a.1 7903740 7907095 1

1 Sequence

Length
1914

1 Sequence Ontology Term

Identifier Name Description
transcript