WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C55F2.1a.2 Sequence Name  C55F2.1a.2
Length (nt)  1564   Chromosome Location  IV: 7891380-7900257
Chromosome . Primary Identifier  IV Chromosome Location . Start  7891380
Chromosome Location . End  7900257 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C55F2.1a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016957 atic-1 C55F2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C55F2.1a C55F2.1a 1161   IV: 7892718-7892730

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C55F2.1a.2 7891380 7900257 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132270   111   IV: 7891380-7891490 Caenorhabditis elegans
Exon132272   97   IV: 7891599-7891695 Caenorhabditis elegans
Exon132276   66   IV: 7892665-7892730 Caenorhabditis elegans
Exon132280   126   IV: 7892988-7893113 Caenorhabditis elegans
Exon132284   114   IV: 7893686-7893799 Caenorhabditis elegans
Exon132288   51   IV: 7893978-7894028 Caenorhabditis elegans
Exon132290   82   IV: 7894280-7894361 Caenorhabditis elegans
Exon132294   94   IV: 7894407-7894500 Caenorhabditis elegans
Exon132299   129   IV: 7894544-7894672 Caenorhabditis elegans
Exon132303   93   IV: 7894775-7894867 Caenorhabditis elegans
Exon132307   74   IV: 7895068-7895141 Caenorhabditis elegans
Exon132321   112   IV: 7898746-7898857 Caenorhabditis elegans
Exon132325   57   IV: 7898990-7899046 Caenorhabditis elegans
Exon132329   96   IV: 7899234-7899329 Caenorhabditis elegans
Exon132335   262   IV: 7899996-7900257 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C55F2.1a.2 7891380 7900257 1

1 Sequence

Length
1564

1 Sequence Ontology Term

Identifier Name Description
transcript