WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C55F2.1c.1 Sequence Name  C55F2.1c.1
Length (nt)  1564   Chromosome Location  IV: 7891317-7900245
Chromosome . Primary Identifier  IV Chromosome Location . Start  7891317
Chromosome Location . End  7900245 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C55F2.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016957 atic-1 C55F2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C55F2.1c C55F2.1c 1395   IV: 7891356-7891490

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C55F2.1c.1 7891317 7900245 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132269   174   IV: 7891317-7891490 Caenorhabditis elegans
Exon132274   97   IV: 7891599-7891695 Caenorhabditis elegans
Exon132278   66   IV: 7892665-7892730 Caenorhabditis elegans
Exon132282   126   IV: 7892988-7893113 Caenorhabditis elegans
Exon132286   114   IV: 7893686-7893799 Caenorhabditis elegans
Exon132292   82   IV: 7894280-7894361 Caenorhabditis elegans
Exon132296   94   IV: 7894407-7894500 Caenorhabditis elegans
Exon132301   129   IV: 7894544-7894672 Caenorhabditis elegans
Exon132305   93   IV: 7894775-7894867 Caenorhabditis elegans
Exon132309   74   IV: 7895068-7895141 Caenorhabditis elegans
Exon132323   112   IV: 7898746-7898857 Caenorhabditis elegans
Exon132327   57   IV: 7898990-7899046 Caenorhabditis elegans
Exon132331   96   IV: 7899234-7899329 Caenorhabditis elegans
Exon132332   250   IV: 7899996-7900245 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C55F2.1c.1 7891317 7900245 1

1 Sequence

Length
1564

1 Sequence Ontology Term

Identifier Name Description
transcript