WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C55F2.1b.1 Sequence Name  C55F2.1b.1
Length (nt)  1959   Chromosome Location  IV: 7882028-7900250
Chromosome . Primary Identifier  IV Chromosome Location . Start  7882028
Chromosome Location . End  7900250 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C55F2.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016957 atic-1 C55F2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C55F2.1b C55F2.1b 1785   IV: 7882067-7882088

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C55F2.1b.1 7882028 7900250 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132259   61   IV: 7882028-7882088 Caenorhabditis elegans
Exon132261   248   IV: 7882359-7882606 Caenorhabditis elegans
Exon132263   112   IV: 7883837-7883948 Caenorhabditis elegans
Exon132265   92   IV: 7885446-7885537 Caenorhabditis elegans
Exon132268   51   IV: 7886826-7886876 Caenorhabditis elegans
Exon132273   97   IV: 7891599-7891695 Caenorhabditis elegans
Exon132277   66   IV: 7892665-7892730 Caenorhabditis elegans
Exon132281   126   IV: 7892988-7893113 Caenorhabditis elegans
Exon132285   114   IV: 7893686-7893799 Caenorhabditis elegans
Exon132291   82   IV: 7894280-7894361 Caenorhabditis elegans
Exon132295   94   IV: 7894407-7894500 Caenorhabditis elegans
Exon132300   129   IV: 7894544-7894672 Caenorhabditis elegans
Exon132304   93   IV: 7894775-7894867 Caenorhabditis elegans
Exon132308   74   IV: 7895068-7895141 Caenorhabditis elegans
Exon132322   112   IV: 7898746-7898857 Caenorhabditis elegans
Exon132326   57   IV: 7898990-7899046 Caenorhabditis elegans
Exon132330   96   IV: 7899234-7899329 Caenorhabditis elegans
Exon132333   255   IV: 7899996-7900250 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C55F2.1b.1 7882028 7900250 1

1 Sequence

Length
1959

1 Sequence Ontology Term

Identifier Name Description
transcript