WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C55F2.1a.1 Sequence Name  C55F2.1a.1
Length (nt)  2019   Chromosome Location  IV: 7882026-7900257
Chromosome . Primary Identifier  IV Chromosome Location . Start  7882026
Chromosome Location . End  7900257 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C55F2.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016957 atic-1 C55F2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C55F2.1a C55F2.1a 1161   IV: 7892718-7892730

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C55F2.1a.1 7882026 7900257 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132258   63   IV: 7882026-7882088 Caenorhabditis elegans
Exon132260   248   IV: 7882359-7882606 Caenorhabditis elegans
Exon132262   112   IV: 7883837-7883948 Caenorhabditis elegans
Exon132264   92   IV: 7885446-7885537 Caenorhabditis elegans
Exon132267   51   IV: 7886826-7886876 Caenorhabditis elegans
Exon132271   97   IV: 7891599-7891695 Caenorhabditis elegans
Exon132275   66   IV: 7892665-7892730 Caenorhabditis elegans
Exon132279   126   IV: 7892988-7893113 Caenorhabditis elegans
Exon132283   114   IV: 7893686-7893799 Caenorhabditis elegans
Exon132287   51   IV: 7893978-7894028 Caenorhabditis elegans
Exon132289   82   IV: 7894280-7894361 Caenorhabditis elegans
Exon132293   94   IV: 7894407-7894500 Caenorhabditis elegans
Exon132298   129   IV: 7894544-7894672 Caenorhabditis elegans
Exon132302   93   IV: 7894775-7894867 Caenorhabditis elegans
Exon132306   74   IV: 7895068-7895141 Caenorhabditis elegans
Exon132320   112   IV: 7898746-7898857 Caenorhabditis elegans
Exon132324   57   IV: 7898990-7899046 Caenorhabditis elegans
Exon132328   96   IV: 7899234-7899329 Caenorhabditis elegans
Exon132334   262   IV: 7899996-7900257 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C55F2.1a.1 7882026 7900257 1

1 Sequence

Length
2019

1 Sequence Ontology Term

Identifier Name Description
transcript