WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C46A5.9.1 Sequence Name  C46A5.9.1
Length (nt)  2790   Chromosome Location  IV: 7770770-7774275
Chromosome . Primary Identifier  IV Chromosome Location . Start  7770770
Chromosome Location . End  7774275 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C46A5.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001827 hcf-1 C46A5.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C46A5.9 C46A5.9 2349   IV: 7771206-7771346

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C46A5.9.1 7770770 7774275 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon131949   577   IV: 7770770-7771346 Caenorhabditis elegans
Exon131950   306   IV: 7771738-7772043 Caenorhabditis elegans
Exon131951   714   IV: 7772178-7772891 Caenorhabditis elegans
Exon131952   962   IV: 7772947-7773908 Caenorhabditis elegans
Exon131953   101   IV: 7773954-7774054 Caenorhabditis elegans
Exon131954   77   IV: 7774101-7774177 Caenorhabditis elegans
Exon131955   53   IV: 7774223-7774275 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C46A5.9.1 7770770 7774275 -1

1 Sequence

Length
2790

1 Sequence Ontology Term

Identifier Name Description
transcript