WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F33D4.2g.1 Sequence Name  F33D4.2g.1
Length (nt)  5142   Chromosome Location  IV: 7681425-7691446
Chromosome . Primary Identifier  IV Chromosome Location . Start  7681425
Chromosome Location . End  7691446 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F33D4.2g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002173 itr-1 F33D4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F33D4.2g F33D4.2g 5142   IV: 7681425-7681468

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F33D4.2g.1 7681425 7691446 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon131559   44   IV: 7681425-7681468 Caenorhabditis elegans
Exon131565   144   IV: 7681709-7681852 Caenorhabditis elegans
Exon131571   208   IV: 7681906-7682113 Caenorhabditis elegans
Exon131577   150   IV: 7682273-7682422 Caenorhabditis elegans
Exon131583   288   IV: 7682825-7683112 Caenorhabditis elegans
Exon131589   159   IV: 7683159-7683317 Caenorhabditis elegans
Exon131595   158   IV: 7685672-7685829 Caenorhabditis elegans
Exon131603   53   IV: 7686062-7686114 Caenorhabditis elegans
Exon131609   122   IV: 7686160-7686281 Caenorhabditis elegans
Exon131615   201   IV: 7686329-7686529 Caenorhabditis elegans
Exon131621   447   IV: 7686699-7687145 Caenorhabditis elegans
Exon131627   140   IV: 7687190-7687329 Caenorhabditis elegans
Exon131633   234   IV: 7687534-7687767 Caenorhabditis elegans
Exon131639   120   IV: 7687817-7687936 Caenorhabditis elegans
Exon131645   316   IV: 7687983-7688298 Caenorhabditis elegans
Exon131651   795   IV: 7688347-7689141 Caenorhabditis elegans
Exon131657   1351   IV: 7689192-7690542 Caenorhabditis elegans
Exon131663   122   IV: 7690615-7690736 Caenorhabditis elegans
Exon131666   24   IV: 7691142-7691165 Caenorhabditis elegans
Exon131672   66   IV: 7691381-7691446 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F33D4.2g.1 7681425 7691446 1

1 Sequence

Length
5142

1 Sequence Ontology Term

Identifier Name Description
transcript