WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F33D4.2f.1 Sequence Name  F33D4.2f.1
Length (nt)  8827   Chromosome Location  IV: 7681359-7696923
Chromosome . Primary Identifier  IV Chromosome Location . Start  7681359
Chromosome Location . End  7696923 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F33D4.2f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002173 itr-1 F33D4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F33D4.2f F33D4.2f 8541   IV: 7681425-7681468

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F33D4.2f.1 7681359 7696923 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

32 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon131558   110   IV: 7681359-7681468 Caenorhabditis elegans
Exon131564   144   IV: 7681709-7681852 Caenorhabditis elegans
Exon131570   208   IV: 7681906-7682113 Caenorhabditis elegans
Exon131576   150   IV: 7682273-7682422 Caenorhabditis elegans
Exon131582   288   IV: 7682825-7683112 Caenorhabditis elegans
Exon131588   159   IV: 7683159-7683317 Caenorhabditis elegans
Exon131594   158   IV: 7685672-7685829 Caenorhabditis elegans
Exon131602   53   IV: 7686062-7686114 Caenorhabditis elegans
Exon131608   122   IV: 7686160-7686281 Caenorhabditis elegans
Exon131614   201   IV: 7686329-7686529 Caenorhabditis elegans
Exon131620   447   IV: 7686699-7687145 Caenorhabditis elegans
Exon131626   140   IV: 7687190-7687329 Caenorhabditis elegans
Exon131632   234   IV: 7687534-7687767 Caenorhabditis elegans
Exon131638   120   IV: 7687817-7687936 Caenorhabditis elegans
Exon131644   316   IV: 7687983-7688298 Caenorhabditis elegans
Exon131650   795   IV: 7688347-7689141 Caenorhabditis elegans
Exon131656   1351   IV: 7689192-7690542 Caenorhabditis elegans
Exon131662   122   IV: 7690615-7690736 Caenorhabditis elegans
Exon131670   102   IV: 7691379-7691480 Caenorhabditis elegans
Exon131676   264   IV: 7691552-7691815 Caenorhabditis elegans
Exon131682   115   IV: 7692131-7692245 Caenorhabditis elegans
Exon131687   176   IV: 7692298-7692473 Caenorhabditis elegans
Exon131692   142   IV: 7692521-7692662 Caenorhabditis elegans
Exon131697   27   IV: 7692937-7692963 Caenorhabditis elegans
Exon131702   169   IV: 7693381-7693549 Caenorhabditis elegans
Exon131707   647   IV: 7693593-7694239 Caenorhabditis elegans
Exon131712   272   IV: 7694285-7694556 Caenorhabditis elegans
Exon131717   316   IV: 7694922-7695237 Caenorhabditis elegans
Exon131722   188   IV: 7695289-7695476 Caenorhabditis elegans
Exon131727   313   IV: 7695524-7695836 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F33D4.2f.1 7681359 7696923 1

1 Sequence

Length
8827

1 Sequence Ontology Term

Identifier Name Description
transcript