WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49E8.3b.1 Sequence Name  F49E8.3b.1
Length (nt)  2847   Chromosome Location  IV: 7544140-7550804
Chromosome . Primary Identifier  IV Chromosome Location . Start  7544140
Chromosome Location . End  7550804 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E8.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003914 pam-1 F49E8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49E8.3b F49E8.3b 2847   IV: 7544140-7544226

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F49E8.3b.1 7544140 7550804 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon131131   87   IV: 7544140-7544226 Caenorhabditis elegans
Exon131135   661   IV: 7544273-7544933 Caenorhabditis elegans
Exon131140   929   IV: 7544980-7545908 Caenorhabditis elegans
Exon131144   235   IV: 7545954-7546188 Caenorhabditis elegans
Exon131148   639   IV: 7546265-7546903 Caenorhabditis elegans
Exon131152   105   IV: 7547013-7547117 Caenorhabditis elegans
Exon131169   145   IV: 7550045-7550189 Caenorhabditis elegans
Exon131171   46   IV: 7550759-7550804 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F49E8.3b.1 7544140 7550804 -1

1 Sequence

Length
2847

1 Sequence Ontology Term

Identifier Name Description
transcript