WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C48A7.2b.1 Sequence Name  C48A7.2b.1
Length (nt)  1389   Chromosome Location  IV: 7394608-7396726
Chromosome . Primary Identifier  IV Chromosome Location . Start  7394608
Chromosome Location . End  7396726 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48A7.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016739 pitr-1 C48A7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C48A7.2b C48A7.2b 1389   IV: 7394608-7394866

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C48A7.2b.1 7394608 7396726 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon130474   259   IV: 7394608-7394866 Caenorhabditis elegans
Exon130476   86   IV: 7394943-7395028 Caenorhabditis elegans
Exon130479   97   IV: 7395089-7395185 Caenorhabditis elegans
Exon130482   120   IV: 7395233-7395352 Caenorhabditis elegans
Exon130485   626   IV: 7395526-7396151 Caenorhabditis elegans
Exon130487   106   IV: 7396195-7396300 Caenorhabditis elegans
Exon130489   95   IV: 7396632-7396726 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C48A7.2b.1 7394608 7396726 1

1 Sequence

Length
1389

1 Sequence Ontology Term

Identifier Name Description
transcript