WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C48A7.2a.1 Sequence Name  C48A7.2a.1
Length (nt)  2463   Chromosome Location  IV: 7394085-7397584
Chromosome . Primary Identifier  IV Chromosome Location . Start  7394085
Chromosome Location . End  7397584 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48A7.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016739 pitr-1 C48A7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C48A7.2a C48A7.2a 1593   IV: 7394097-7394213

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C48A7.2a.1 7394085 7397584 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon130468   129   IV: 7394085-7394213 Caenorhabditis elegans
Exon130470   67   IV: 7394262-7394328 Caenorhabditis elegans
Exon130472   279   IV: 7394588-7394866 Caenorhabditis elegans
Exon130475   86   IV: 7394943-7395028 Caenorhabditis elegans
Exon130478   97   IV: 7395089-7395185 Caenorhabditis elegans
Exon130481   120   IV: 7395233-7395352 Caenorhabditis elegans
Exon130484   626   IV: 7395526-7396151 Caenorhabditis elegans
Exon130486   106   IV: 7396195-7396300 Caenorhabditis elegans
Exon130491   953   IV: 7396632-7397584 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C48A7.2a.1 7394085 7397584 1

1 Sequence

Length
2463

1 Sequence Ontology Term

Identifier Name Description
transcript