WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y40C5A.4b.1 Sequence Name  Y40C5A.4b.1
Length (nt)  2275   Chromosome Location  IV: 7349277-7365111
Chromosome . Primary Identifier  IV Chromosome Location . Start  7349277
Chromosome Location . End  7365111 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y40C5A.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021497 Y40C5A.4 Y40C5A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y40C5A.4b Y40C5A.4b 1278   IV: 7349375-7349476

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y40C5A.4b.1 7349277 7365111 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon130352   200   IV: 7349277-7349476 Caenorhabditis elegans
Exon130363   150   IV: 7349895-7350044 Caenorhabditis elegans
Exon130369   138   IV: 7350100-7350237 Caenorhabditis elegans
Exon130375   115   IV: 7350574-7350688 Caenorhabditis elegans
Exon130382   100   IV: 7351408-7351507 Caenorhabditis elegans
Exon130388   133   IV: 7351556-7351688 Caenorhabditis elegans
Exon130394   264   IV: 7351743-7352006 Caenorhabditis elegans
Exon130399   284   IV: 7352179-7352462 Caenorhabditis elegans
Exon130407   426   IV: 7363980-7364405 Caenorhabditis elegans
Exon130412   275   IV: 7364598-7364872 Caenorhabditis elegans
Exon130419   190   IV: 7364922-7365111 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y40C5A.4b.1 7349277 7365111 -1

1 Sequence

Length
2275

1 Sequence Ontology Term

Identifier Name Description
transcript