WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y40C5A.3d.1 Sequence Name  Y40C5A.3d.1
Length (nt)  3465   Chromosome Location  IV: 7333638-7346851
Chromosome . Primary Identifier  IV Chromosome Location . Start  7333638
Chromosome Location . End  7346851 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y40C5A.3d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021496 daf-42 Y40C5A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y40C5A.3d Y40C5A.3d 3465   IV: 7333638-7333683

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y40C5A.3d.1 7333638 7346851 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129980   46   IV: 7333638-7333683 Caenorhabditis elegans
Exon129989   77   IV: 7333730-7333806 Caenorhabditis elegans
Exon130006   396   IV: 7333858-7334253 Caenorhabditis elegans
Exon130023   271   IV: 7334332-7334602 Caenorhabditis elegans
Exon130040   63   IV: 7334684-7334746 Caenorhabditis elegans
Exon130086   150   IV: 7335561-7335710 Caenorhabditis elegans
Exon130103   223   IV: 7335755-7335977 Caenorhabditis elegans
Exon130120   345   IV: 7336025-7336369 Caenorhabditis elegans
Exon130151   75   IV: 7336664-7336738 Caenorhabditis elegans
Exon130167   198   IV: 7336784-7336981 Caenorhabditis elegans
Exon130184   1131   IV: 7339843-7340973 Caenorhabditis elegans
Exon130200   63   IV: 7341121-7341183 Caenorhabditis elegans
Exon130232   69   IV: 7342157-7342225 Caenorhabditis elegans
Exon130248   43   IV: 7342323-7342365 Caenorhabditis elegans
Exon130265   98   IV: 7342452-7342549 Caenorhabditis elegans
Exon130295   94   IV: 7342964-7343057 Caenorhabditis elegans
Exon130313   37   IV: 7343105-7343141 Caenorhabditis elegans
Exon130335   86   IV: 7346766-7346851 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y40C5A.3d.1 7333638 7346851 -1

1 Sequence

Length
3465

1 Sequence Ontology Term

Identifier Name Description
transcript