WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y40C5A.2.1 Sequence Name  Y40C5A.2.1
Length (nt)  2390   Chromosome Location  IV: 7329611-7332795
Chromosome . Primary Identifier  IV Chromosome Location . Start  7329611
Chromosome Location . End  7332795 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y40C5A.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003841 ocr-4 Y40C5A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y40C5A.2 Y40C5A.2 2271   IV: 7329679-7329852

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y40C5A.2.1 7329611 7332795 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129958   242   IV: 7329611-7329852 Caenorhabditis elegans
Exon129959   246   IV: 7329900-7330145 Caenorhabditis elegans
Exon129960   280   IV: 7330220-7330499 Caenorhabditis elegans
Exon129961   260   IV: 7330552-7330811 Caenorhabditis elegans
Exon129963   166   IV: 7330853-7331018 Caenorhabditis elegans
Exon129964   236   IV: 7331264-7331499 Caenorhabditis elegans
Exon129965   102   IV: 7331546-7331647 Caenorhabditis elegans
Exon129966   154   IV: 7331690-7331843 Caenorhabditis elegans
Exon129967   482   IV: 7332051-7332532 Caenorhabditis elegans
Exon129968   222   IV: 7332574-7332795 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y40C5A.2.1 7329611 7332795 -1

1 Sequence

Length
2390

1 Sequence Ontology Term

Identifier Name Description
transcript