WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y40C5A.1.1 Sequence Name  Y40C5A.1.1
Length (nt)  859   Chromosome Location  IV: 7327771-7328975
Chromosome . Primary Identifier  IV Chromosome Location . Start  7327771
Chromosome Location . End  7328975 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y40C5A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021495 sqst-2 Y40C5A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y40C5A.1 Y40C5A.1 729   IV: 7327886-7328289

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y40C5A.1.1 7327771 7328975 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129951   519   IV: 7327771-7328289 Caenorhabditis elegans
Exon129953   105   IV: 7328546-7328650 Caenorhabditis elegans
Exon129954   151   IV: 7328697-7328847 Caenorhabditis elegans
Exon129955   84   IV: 7328892-7328975 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y40C5A.1.1 7327771 7328975 -1

1 Sequence

Length
859

1 Sequence Ontology Term

Identifier Name Description
transcript