WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42C5.10.1 Sequence Name  F42C5.10.1
Length (nt)  4037   Chromosome Location  IV: 7320734-7326663
Chromosome . Primary Identifier  IV Chromosome Location . Start  7320734
Chromosome Location . End  7326663 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42C5.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018350 ifo-1 F42C5.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42C5.10 F42C5.10 3879   IV: 7320891-7321060

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F42C5.10.1 7320734 7326663 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129936   327   IV: 7320734-7321060 Caenorhabditis elegans
Exon129937   186   IV: 7321141-7321326 Caenorhabditis elegans
Exon129938   83   IV: 7321378-7321460 Caenorhabditis elegans
Exon129939   139   IV: 7321508-7321646 Caenorhabditis elegans
Exon129940   495   IV: 7321694-7322188 Caenorhabditis elegans
Exon129941   249   IV: 7322236-7322484 Caenorhabditis elegans
Exon129942   420   IV: 7322533-7322952 Caenorhabditis elegans
Exon129943   1000   IV: 7323284-7324283 Caenorhabditis elegans
Exon129944   97   IV: 7324382-7324478 Caenorhabditis elegans
Exon129945   806   IV: 7324521-7325326 Caenorhabditis elegans
Exon129946   66   IV: 7325745-7325810 Caenorhabditis elegans
Exon129947   75   IV: 7326444-7326518 Caenorhabditis elegans
Exon129948   94   IV: 7326570-7326663 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F42C5.10.1 7320734 7326663 -1

1 Sequence

Length
4037

1 Sequence Ontology Term

Identifier Name Description
transcript