Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:F42C5.16 | F42C5.16 |
289
 |
IV: 7320100-7320388 |
Other
11 Allele
| Public Name |
|---|
| gk964500 |
| gk963722 |
| gk963417 |
| gk963416 |
| tm11225 |
| gk848395 |
| gk445465 |
| gk672536 |
| gk345894 |
| gk684489 |
| gk576179 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00201602 | 7320100 | 7320388 | 1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrIV_7320389..7320733 | 345 | IV: 7320389-7320733 | Caenorhabditis elegans |
4 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Transcripts that showed significantly increased expression in ogt-1(ok1474) neuronal cells isolated by FACs comparing to in FACs isolated neuronal cells from wild type. | DESeq2, fold change > 2, FDR < 0.05. | WBPaper00066485:ogt-1(ok1474)_upregulated_neuron | |
| Transcripts that showed significantly increased expression in ints-5(RNAi) comparing to in N2. | DESeq2 and edgeR. | WBPaper00056284:ints-5(RNAi)_upregulated | |
| Transcripts significantly enriched in AVK neurons comparing to all cell types at L1 larva stage. | edgeR, FDR < 0.001, fold change > 2. | WBPaper00055565:AVK_enriched | |
| ncRNAs with significantly decreased expression in cep-1(gk138) than in N2 under normal conditions, according to RNAseq. | ncRNAs with more than 2 fold difference in expression are considered differentially expressed | WBPaper00045380:cep-1(gk138)_downregulated_normal |
