WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42C5.2.1 Sequence Name  F42C5.2.1
Length (nt)  1221   Chromosome Location  IV: 7305625-7308451
Chromosome . Primary Identifier  IV Chromosome Location . Start  7305625
Chromosome Location . End  7308451 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42C5.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018344 npr-27 F42C5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42C5.2 F42C5.2 1101   IV: 7305644-7305716

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F42C5.2.1 7305625 7308451 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129906   92   IV: 7305625-7305716 Caenorhabditis elegans
Exon129907   109   IV: 7306522-7306630 Caenorhabditis elegans
Exon129908   252   IV: 7307115-7307366 Caenorhabditis elegans
Exon129909   492   IV: 7307585-7308076 Caenorhabditis elegans
Exon129910   53   IV: 7308125-7308177 Caenorhabditis elegans
Exon129911   223   IV: 7308229-7308451 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F42C5.2.1 7305625 7308451 1

1 Sequence

Length
1221

1 Sequence Ontology Term

Identifier Name Description
transcript