WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42C5.5a.1 Sequence Name  F42C5.5a.1
Length (nt)  1085   Chromosome Location  IV: 7292534-7294221
Chromosome . Primary Identifier  IV Chromosome Location . Start  7292534
Chromosome Location . End  7294221 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42C5.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018347 F42C5.5 F42C5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42C5.5a F42C5.5a 993   IV: 7292602-7292652

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F42C5.5a.1 7292534 7294221 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129898   119   IV: 7292534-7292652 Caenorhabditis elegans
Exon129900   365   IV: 7292703-7293067 Caenorhabditis elegans
Exon129903   391   IV: 7293118-7293508 Caenorhabditis elegans
Exon129904   151   IV: 7293967-7294117 Caenorhabditis elegans
Exon129905   59   IV: 7294163-7294221 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F42C5.5a.1 7292534 7294221 -1

1 Sequence

Length
1085

1 Sequence Ontology Term

Identifier Name Description
transcript