WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42C5.4a.1 Sequence Name  F42C5.4a.1
Length (nt)  2264   Chromosome Location  IV: 7288055-7292127
Chromosome . Primary Identifier  IV Chromosome Location . Start  7288055
Chromosome Location . End  7292127 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42C5.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018346 F42C5.4 F42C5.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42C5.4a F42C5.4a 2139   IV: 7288180-7288839

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F42C5.4a.1 7288055 7292127 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129881   785   IV: 7288055-7288839 Caenorhabditis elegans
Exon129883   114   IV: 7288925-7289038 Caenorhabditis elegans
Exon129885   113   IV: 7289088-7289200 Caenorhabditis elegans
Exon129887   79   IV: 7289448-7289526 Caenorhabditis elegans
Exon129889   662   IV: 7289572-7290233 Caenorhabditis elegans
Exon129891   193   IV: 7290416-7290608 Caenorhabditis elegans
Exon129893   191   IV: 7290683-7290873 Caenorhabditis elegans
Exon129896   69   IV: 7290981-7291049 Caenorhabditis elegans
Exon129897   58   IV: 7292070-7292127 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F42C5.4a.1 7288055 7292127 -1

1 Sequence

Length
2264

1 Sequence Ontology Term

Identifier Name Description
transcript