WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42C5.3a.1 Sequence Name  F42C5.3a.1
Length (nt)  1000   Chromosome Location  IV: 7286097-7287574
Chromosome . Primary Identifier  IV Chromosome Location . Start  7286097
Chromosome Location . End  7287574 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42C5.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018345 F42C5.3 F42C5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42C5.3a F42C5.3a 867   IV: 7286182-7286319

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F42C5.3a.1 7286097 7287574 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129870   223   IV: 7286097-7286319 Caenorhabditis elegans
Exon129871   69   IV: 7286468-7286536 Caenorhabditis elegans
Exon129873   120   IV: 7286585-7286704 Caenorhabditis elegans
Exon129875   234   IV: 7286748-7286981 Caenorhabditis elegans
Exon129878   195   IV: 7287176-7287370 Caenorhabditis elegans
Exon129879   159   IV: 7287416-7287574 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F42C5.3a.1 7286097 7287574 -1

1 Sequence

Length
1000

1 Sequence Ontology Term

Identifier Name Description
transcript