WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C42D4.12.1 Sequence Name  C42D4.12.1
Length (nt)  1128   Chromosome Location  IV: 7185283-7186856
Chromosome . Primary Identifier  IV Chromosome Location . Start  7185283
Chromosome Location . End  7186856 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C42D4.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006276 str-249 C42D4.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C42D4.12 C42D4.12 1128   IV: 7185283-7185410

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C42D4.12.1 7185283 7186856 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129542   128   IV: 7185283-7185410 Caenorhabditis elegans
Exon129545   313   IV: 7185459-7185771 Caenorhabditis elegans
Exon129546   142   IV: 7185821-7185962 Caenorhabditis elegans
Exon129547   195   IV: 7186168-7186362 Caenorhabditis elegans
Exon129548   79   IV: 7186408-7186486 Caenorhabditis elegans
Exon129549   88   IV: 7186541-7186628 Caenorhabditis elegans
Exon129550   183   IV: 7186674-7186856 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C42D4.12.1 7185283 7186856 -1

1 Sequence

Length
1128

1 Sequence Ontology Term

Identifier Name Description
transcript