WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00006250 Gene Name  str-219
Sequence Name  ? C42D4.10 Organism  Caenorhabditis elegans
Automated Description  Is affected by resveratrol based on microarray studies. Biotype  SO:0000336
Genetic Position  IV :3.29151 ±5e-05 Length (nt)  ? 1203
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00006250

Genomics

0 Transcripts

 

Other

0 CDSs

0 RNAi Result

14 Allele

Public Name
gk964500
gk963722
gk963417
gk963416
gk487635
gk536926
gk608660
gk423692
gk878118
gk391160
gk204967
gk204968
WBVar00190405
gk204966

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00006250 7171489 7172691 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrIV_7171323..7171488   166 IV: 7171323-7171488 Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Genes found to be regulated in daf-16(mgDf50) by resveratrol treatment with p < 0.01. N.A. WBPaper00026929:Resveratrol_regulated_daf-16
Bacteria Diet: L. plantarum with pdxH mutant vs. L. plantarum Transcripts that showed significantly increased expression in N2 animals fed with L. plantarum with pdxH mutant, comparing to in N2 animals fed with L. plantarum. GFold3, logFC < -1 or > 1. WBPaper00066703:L.plantarum-pdxH_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00006250 7171489 7172691 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
1203

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrIV_7172692..7172972   281 IV: 7172692-7172972 Caenorhabditis elegans