WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06G3.1a.1 Sequence Name  C06G3.1a.1
Length (nt)  1382   Chromosome Location  IV: 7050156-7053450
Chromosome . Primary Identifier  IV Chromosome Location . Start  7050156
Chromosome Location . End  7053450 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06G3.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003695 nhr-105 C06G3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06G3.1a C06G3.1a 1290   IV: 7050163-7050223

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C06G3.1a.1 7050156 7053450 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon128932   68   IV: 7050156-7050223 Caenorhabditis elegans
Exon128934   195   IV: 7050936-7051130 Caenorhabditis elegans
Exon128936   72   IV: 7051182-7051253 Caenorhabditis elegans
Exon128939   101   IV: 7051549-7051649 Caenorhabditis elegans
Exon128941   144   IV: 7051728-7051871 Caenorhabditis elegans
Exon128943   126   IV: 7051953-7052078 Caenorhabditis elegans
Exon128945   89   IV: 7052126-7052214 Caenorhabditis elegans
Exon128947   206   IV: 7052262-7052467 Caenorhabditis elegans
Exon128950   158   IV: 7053019-7053176 Caenorhabditis elegans
Exon128952   223   IV: 7053228-7053450 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C06G3.1a.1 7050156 7053450 1

1 Sequence

Length
1382

1 Sequence Ontology Term

Identifier Name Description
transcript