WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0478.1a.1 Sequence Name  B0478.1a.1
Length (nt)  1555   Chromosome Location  IV: 6957641-6963719
Chromosome . Primary Identifier  IV Chromosome Location . Start  6957641
Chromosome Location . End  6963719 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0478.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002178 jnk-1 B0478.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0478.1a B0478.1a 1392   IV: 6957677-6957722

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0478.1a.1 6957641 6963719 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon128645   82   IV: 6957641-6957722 Caenorhabditis elegans
Exon128650   110   IV: 6960209-6960318 Caenorhabditis elegans
Exon128653   159   IV: 6960727-6960885 Caenorhabditis elegans
Exon128656   86   IV: 6960933-6961018 Caenorhabditis elegans
Exon128659   130   IV: 6961142-6961271 Caenorhabditis elegans
Exon128662   198   IV: 6961321-6961518 Caenorhabditis elegans
Exon128665   166   IV: 6961797-6961962 Caenorhabditis elegans
Exon128668   99   IV: 6962123-6962221 Caenorhabditis elegans
Exon128671   79   IV: 6962270-6962348 Caenorhabditis elegans
Exon128674   77   IV: 6962406-6962482 Caenorhabditis elegans
Exon128677   116   IV: 6962526-6962641 Caenorhabditis elegans
Exon128684   253   IV: 6963467-6963719 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0478.1a.1 6957641 6963719 1

1 Sequence

Length
1555

1 Sequence Ontology Term

Identifier Name Description
transcript