WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05A12.2c.1 Sequence Name  T05A12.2c.1
Length (nt)  1617   Chromosome Location  IV: 6876860-6878877
Chromosome . Primary Identifier  IV Chromosome Location . Start  6876860
Chromosome Location . End  6878877 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05A12.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006608 tre-2 T05A12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05A12.2c T05A12.2c 1617   IV: 6876860-6877262

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T05A12.2c.1 6876860 6878877 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon128415   403   IV: 6876860-6877262 Caenorhabditis elegans
Exon128419   272   IV: 6877313-6877584 Caenorhabditis elegans
Exon128422   217   IV: 6877632-6877848 Caenorhabditis elegans
Exon128425   188   IV: 6877902-6878089 Caenorhabditis elegans
Exon128428   145   IV: 6878140-6878284 Caenorhabditis elegans
Exon128431   114   IV: 6878334-6878447 Caenorhabditis elegans
Exon128434   80   IV: 6878496-6878575 Caenorhabditis elegans
Exon128437   87   IV: 6878631-6878717 Caenorhabditis elegans
Exon128438   111   IV: 6878767-6878877 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T05A12.2c.1 6876860 6878877 -1

1 Sequence

Length
1617

1 Sequence Ontology Term

Identifier Name Description
transcript