WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F38A5.1b.1 Sequence Name  F38A5.1b.1
Length (nt)  1928   Chromosome Location  IV: 6579840-6582618
Chromosome . Primary Identifier  IV Chromosome Location . Start  6579840
Chromosome Location . End  6582618 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38A5.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018160 odr-8 F38A5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F38A5.1b F38A5.1b 1728   IV: 6580040-6580190

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F38A5.1b.1 6579840 6582618 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon127518   351   IV: 6579840-6580190 Caenorhabditis elegans
Exon127520   169   IV: 6580241-6580409 Caenorhabditis elegans
Exon127522   97   IV: 6580455-6580551 Caenorhabditis elegans
Exon127524   182   IV: 6580597-6580778 Caenorhabditis elegans
Exon127526   150   IV: 6581054-6581203 Caenorhabditis elegans
Exon127528   100   IV: 6581251-6581350 Caenorhabditis elegans
Exon127530   158   IV: 6581398-6581555 Caenorhabditis elegans
Exon127532   97   IV: 6581602-6581698 Caenorhabditis elegans
Exon127534   195   IV: 6581744-6581938 Caenorhabditis elegans
Exon127536   182   IV: 6581990-6582171 Caenorhabditis elegans
Exon127538   175   IV: 6582216-6582390 Caenorhabditis elegans
Exon127539   72   IV: 6582547-6582618 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F38A5.1b.1 6579840 6582618 -1

1 Sequence

Length
1928

1 Sequence Ontology Term

Identifier Name Description
transcript