WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F38A5.1a.1 Sequence Name  F38A5.1a.1
Length (nt)  2018   Chromosome Location  IV: 6579836-6582704
Chromosome . Primary Identifier  IV Chromosome Location . Start  6579836
Chromosome Location . End  6582704 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38A5.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018160 odr-8 F38A5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F38A5.1a F38A5.1a 1770   IV: 6580040-6580190

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F38A5.1a.1 6579836 6582704 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon127517   355   IV: 6579836-6580190 Caenorhabditis elegans
Exon127519   169   IV: 6580241-6580409 Caenorhabditis elegans
Exon127521   97   IV: 6580455-6580551 Caenorhabditis elegans
Exon127523   182   IV: 6580597-6580778 Caenorhabditis elegans
Exon127525   150   IV: 6581054-6581203 Caenorhabditis elegans
Exon127527   100   IV: 6581251-6581350 Caenorhabditis elegans
Exon127529   158   IV: 6581398-6581555 Caenorhabditis elegans
Exon127531   97   IV: 6581602-6581698 Caenorhabditis elegans
Exon127533   195   IV: 6581744-6581938 Caenorhabditis elegans
Exon127535   182   IV: 6581990-6582171 Caenorhabditis elegans
Exon127537   175   IV: 6582216-6582390 Caenorhabditis elegans
Exon127540   158   IV: 6582547-6582704 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F38A5.1a.1 6579836 6582704 -1

1 Sequence

Length
2018

1 Sequence Ontology Term

Identifier Name Description
transcript