Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:C43G2.10 | C43G2.10 |
21
 |
IV: 6573299-6573319 |
Other
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00169171 | 6573299 | 6573319 | -1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrIV_6572409..6573298 | 890 | IV: 6572409-6573298 | Caenorhabditis elegans |
2 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Transcripts that showed significantly decreased expression in mrps-5(RNAi) animals comparing to animals injected with empty vector. | Differential expression was assessed using a Partial least-squares discriminant analysis (PLS-DA) using mixomics setting a variable of importance (VIP) score of greater than 1 as significant. | WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA | |
| Diet: supplementation of dietary fat P-80. | Transcripts that showed significantly decreased expression in animals grown with supplementation of dietary fat P-80. | Differential expression was assessed using an empirical Bayes moderated t test within limmas linear model framework including the precisio weights estimated by voom. Fold change > 2, FDR < 0.05 | WBPaper00062534:fat-P-80_downregulated |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrIV_6573320..6574000 | 681 | IV: 6573320-6574000 | Caenorhabditis elegans |
