WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C43G2.1a.1 Sequence Name  C43G2.1a.1
Length (nt)  1788   Chromosome Location  IV: 6552425-6555438
Chromosome . Primary Identifier  IV Chromosome Location . Start  6552425
Chromosome Location . End  6555438 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C43G2.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016610 paqr-1 C43G2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C43G2.1a C43G2.1a 1305   IV: 6552901-6553014

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C43G2.1a.1 6552425 6555438 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon127401   590   IV: 6552425-6553014 Caenorhabditis elegans
Exon127404   167   IV: 6553062-6553228 Caenorhabditis elegans
Exon127408   322   IV: 6553288-6553609 Caenorhabditis elegans
Exon127410   172   IV: 6554243-6554414 Caenorhabditis elegans
Exon127413   210   IV: 6554462-6554671 Caenorhabditis elegans
Exon127417   227   IV: 6554728-6554954 Caenorhabditis elegans
Exon127420   100   IV: 6555339-6555438 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C43G2.1a.1 6552425 6555438 -1

1 Sequence

Length
1788

1 Sequence Ontology Term

Identifier Name Description
transcript