WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01G5.8a.1 Sequence Name  C01G5.8a.1
Length (nt)  2903   Chromosome Location  IV: 6548685-6552511
Chromosome . Primary Identifier  IV Chromosome Location . Start  6548685
Chromosome Location . End  6552511 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01G5.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015310 fan-1 C01G5.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01G5.8a C01G5.8a 2598   IV: 6548914-6549021

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01G5.8a.1 6548685 6552511 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon127366   337   IV: 6548685-6549021 Caenorhabditis elegans
Exon127368   93   IV: 6549069-6549161 Caenorhabditis elegans
Exon127370   137   IV: 6549210-6549346 Caenorhabditis elegans
Exon127372   262   IV: 6549394-6549655 Caenorhabditis elegans
Exon127375   322   IV: 6549708-6550029 Caenorhabditis elegans
Exon127377   95   IV: 6550075-6550169 Caenorhabditis elegans
Exon127379   159   IV: 6550227-6550385 Caenorhabditis elegans
Exon127381   89   IV: 6550470-6550558 Caenorhabditis elegans
Exon127384   102   IV: 6550610-6550711 Caenorhabditis elegans
Exon127386   278   IV: 6550759-6551036 Caenorhabditis elegans
Exon127389   80   IV: 6551080-6551159 Caenorhabditis elegans
Exon127392   307   IV: 6551205-6551511 Caenorhabditis elegans
Exon127395   305   IV: 6551821-6552125 Caenorhabditis elegans
Exon127400   337   IV: 6552175-6552511 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01G5.8a.1 6548685 6552511 1

1 Sequence

Length
2903

1 Sequence Ontology Term

Identifier Name Description
transcript