WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y73B6BL.19.1 Sequence Name  Y73B6BL.19.1
Length (nt)  2299   Chromosome Location  IV: 6378285-6384070
Chromosome . Primary Identifier  IV Chromosome Location . Start  6378285
Chromosome Location . End  6384070 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y73B6BL.19.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022240 shl-1 Y73B6BL.19 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y73B6BL.19 Y73B6BL.19 1737   IV: 6378759-6378836

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y73B6BL.19.1 6378285 6384070 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon126848   552   IV: 6378285-6378836 Caenorhabditis elegans
Exon126849   82   IV: 6378886-6378967 Caenorhabditis elegans
Exon126850   193   IV: 6379575-6379767 Caenorhabditis elegans
Exon126852   103   IV: 6380169-6380271 Caenorhabditis elegans
Exon126853   177   IV: 6380360-6380536 Caenorhabditis elegans
Exon126854   216   IV: 6380804-6381019 Caenorhabditis elegans
Exon126855   109   IV: 6381126-6381234 Caenorhabditis elegans
Exon126858   449   IV: 6381803-6382251 Caenorhabditis elegans
Exon126859   228   IV: 6383090-6383317 Caenorhabditis elegans
Exon126860   190   IV: 6383881-6384070 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y73B6BL.19.1 6378285 6384070 -1

1 Sequence

Length
2299

1 Sequence Ontology Term

Identifier Name Description
transcript