WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T13A10.11a.1 Sequence Name  T13A10.11a.1
Length (nt)  1333   Chromosome Location  IV: 6277436-6279522
Chromosome . Primary Identifier  IV Chromosome Location . Start  6277436
Chromosome Location . End  6279522 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13A10.11a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006416 sams-5 T13A10.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T13A10.11a T13A10.11a 1215   IV: 6277481-6277646

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T13A10.11a.1 6277436 6279522 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon126486   211   IV: 6277436-6277646 Caenorhabditis elegans
Exon126488   410   IV: 6277692-6278101 Caenorhabditis elegans
Exon126491   383   IV: 6278149-6278531 Caenorhabditis elegans
Exon126494   123   IV: 6278577-6278699 Caenorhabditis elegans
Exon126498   61   IV: 6278892-6278952 Caenorhabditis elegans
Exon126501   109   IV: 6279071-6279179 Caenorhabditis elegans
Exon126503   36   IV: 6279487-6279522 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T13A10.11a.1 6277436 6279522 -1

1 Sequence

Length
1333

1 Sequence Ontology Term

Identifier Name Description
transcript