WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00169867 Gene Name  21ur-11480
Sequence Name  ? C46G7.74 Organism  Caenorhabditis elegans
Automated Description  Enriched in VA10 and VA9 based on single-cell RNA-seq studies. Biotype  SO:0001638
Genetic Position  IV :2.89486± Length (nt)  ? 21
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00169867

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C46G7.74 C46G7.74 21   IV: 6013043-6013063
 

Other

0 CDSs

0 RNAi Result

7 Allele

Public Name
gk964500
gk963722
gk963417
gk963375
gk963416
tm11129
gk961239

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00169867 6013043 6013063 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrIV_6012772..6013042   271 IV: 6012772-6013042 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts enriched in VA9_10 according to single cell RNAseq. Genes that pass the Bonferroni threshold for multiple comparisons (q < 0.05) are significantly enriched. WBPaper00066550:VA9_10_enriched

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00169867 6013043 6013063 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
21

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrIV_6013064..6013186   123 IV: 6013064-6013186 Caenorhabditis elegans