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Neuronally enriched transcripts according to a comparison of neuronal nuclei IP samples to total nuclei using isolation of nuclei from tagged specific cell types (INTACT) technology. |
DESEQ2, fold change > 2 and FDR < 0.01. |
WBPaper00062103:neuron_enriched
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Transcripts that showed significantly increased expression in sams-3(RNAi) comparing to N2 animals injected with empty vector. |
Deseq FDR < 0.01, fold change > 2. |
WBPaper00065005:sams-3(RNAi)_upregulated
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Transcripts that showed significantly increased expression in sams-4(RNAi) comparing to N2 animals injected with empty vector. |
Deseq FDR < 0.01, fold change > 2. |
WBPaper00065005:sams-4(RNAi)_upregulated
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Transcripts that showed significantly increased expression in the germline of iff-1(RNAi) animals comparing to the germine of N2 animals applied with control vector at 15C. |
Statistical comparisons were made by two-tailed t-test, n=3 (each replicate contains 150 extruded germ lines from N2 wild-type worms), P < 0.01 was considered significant. |
WBPaper00057288:iff-1(RNAi)_upregulated_transcript
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Transcripts that showed significantly increased expression in mrpl-2(osa3) comparing to wild-type animals. |
Differential expression analysis was performed using DESeq2R package(v.1.10.1).Relative expression of genes with Benjamini-Hochberg corrected P-values (Padj)<0.05 were considered to be differentially expressed. |
WBPaper00060951:mrpl-2(osa3)_upregulated
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