WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06E7.1a.1 Sequence Name  C06E7.1a.1
Length (nt)  1492   Chromosome Location  IV: 5848657-5850843
Chromosome . Primary Identifier  IV Chromosome Location . Start  5848657
Chromosome Location . End  5850843 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06E7.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015538 sams-3 C06E7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06E7.1a C06E7.1a 1215   IV: 5848688-5848759

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C06E7.1a.1 5848657 5850843 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon124114   103   IV: 5848657-5848759 Caenorhabditis elegans
Exon124119   61   IV: 5848888-5848948 Caenorhabditis elegans
Exon124124   123   IV: 5849318-5849440 Caenorhabditis elegans
Exon124126   383   IV: 5849542-5849924 Caenorhabditis elegans
Exon124129   410   IV: 5849976-5850385 Caenorhabditis elegans
Exon124136   412   IV: 5850432-5850843 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C06E7.1a.1 5848657 5850843 1

1 Sequence

Length
1492

1 Sequence Ontology Term

Identifier Name Description
transcript