WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06E7.3a.1 Sequence Name  C06E7.3a.1
Length (nt)  1516   Chromosome Location  IV: 5844061-5846369
Chromosome . Primary Identifier  IV Chromosome Location . Start  5844061
Chromosome Location . End  5846369 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06E7.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015540 sams-4 C06E7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06E7.3a C06E7.3a 1215   IV: 5844328-5844493

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C06E7.3a.1 5844061 5846369 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon124102   433   IV: 5844061-5844493 Caenorhabditis elegans
Exon124104   410   IV: 5844537-5844946 Caenorhabditis elegans
Exon124106   383   IV: 5844998-5845380 Caenorhabditis elegans
Exon124108   123   IV: 5845482-5845604 Caenorhabditis elegans
Exon124110   61   IV: 5845978-5846038 Caenorhabditis elegans
Exon124112   106   IV: 5846264-5846369 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C06E7.3a.1 5844061 5846369 -1

1 Sequence

Length
1516

1 Sequence Ontology Term

Identifier Name Description
transcript