WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C31H1.8c.1 Sequence Name  C31H1.8c.1
Length (nt)  1966   Chromosome Location  IV: 5811582-5814142
Chromosome . Primary Identifier  IV Chromosome Location . Start  5811582
Chromosome Location . End  5814142 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C31H1.8c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016291 oops-1 C31H1.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C31H1.8c C31H1.8c 1599   IV: 5811941-5812315

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C31H1.8c.1 5811582 5814142 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon123955   734   IV: 5811582-5812315 Caenorhabditis elegans
Exon123961   267   IV: 5812617-5812883 Caenorhabditis elegans
Exon123965   195   IV: 5812929-5813123 Caenorhabditis elegans
Exon123969   284   IV: 5813179-5813462 Caenorhabditis elegans
Exon123971   97   IV: 5813511-5813607 Caenorhabditis elegans
Exon123978   129   IV: 5813656-5813784 Caenorhabditis elegans
Exon123980   183   IV: 5813834-5814016 Caenorhabditis elegans
Exon123982   77   IV: 5814066-5814142 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C31H1.8c.1 5811582 5814142 -1

1 Sequence

Length
1966

1 Sequence Ontology Term

Identifier Name Description
transcript