WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C45E5.6a.1 Sequence Name  C45E5.6a.1
Length (nt)  1976   Chromosome Location  IV: 5747363-5749890
Chromosome . Primary Identifier  IV Chromosome Location . Start  5747363
Chromosome Location . End  5749890 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C45E5.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003636 nhr-46 C45E5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C45E5.6a C45E5.6a 1587   IV: 5747752-5747859

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C45E5.6a.1 5747363 5749890 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon123737   497   IV: 5747363-5747859 Caenorhabditis elegans
Exon123740   161   IV: 5747905-5748065 Caenorhabditis elegans
Exon123743   406   IV: 5748116-5748521 Caenorhabditis elegans
Exon123746   476   IV: 5748673-5749148 Caenorhabditis elegans
Exon123750   154   IV: 5749330-5749483 Caenorhabditis elegans
Exon123752   282   IV: 5749609-5749890 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C45E5.6a.1 5747363 5749890 -1

1 Sequence

Length
1976

1 Sequence Ontology Term

Identifier Name Description
transcript