WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C55C3.5.1 Sequence Name  C55C3.5.1
Length (nt)  2108   Chromosome Location  IV: 5695771-5703468
Chromosome . Primary Identifier  IV Chromosome Location . Start  5695771
Chromosome Location . End  5703468 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C55C3.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016955 perm-5 C55C3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C55C3.5 C55C3.5 1557   IV: 5696132-5696292

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C55C3.5.1 5695771 5703468 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon123565   522   IV: 5695771-5696292 Caenorhabditis elegans
Exon123566   335   IV: 5696895-5697229 Caenorhabditis elegans
Exon123567   176   IV: 5698002-5698177 Caenorhabditis elegans
Exon123568   217   IV: 5698233-5698449 Caenorhabditis elegans
Exon123569   179   IV: 5698718-5698896 Caenorhabditis elegans
Exon123570   202   IV: 5699039-5699240 Caenorhabditis elegans
Exon123571   128   IV: 5699423-5699550 Caenorhabditis elegans
Exon123572   139   IV: 5703029-5703167 Caenorhabditis elegans
Exon123573   210   IV: 5703259-5703468 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C55C3.5.1 5695771 5703468 -1

1 Sequence

Length
2108

1 Sequence Ontology Term

Identifier Name Description
transcript