WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C55C3.4.1 Sequence Name  C55C3.4.1
Length (nt)  1442   Chromosome Location  IV: 5676158-5678144
Chromosome . Primary Identifier  IV Chromosome Location . Start  5676158
Chromosome Location . End  5678144 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C55C3.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016954 C55C3.4 C55C3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C55C3.4 C55C3.4 1296   IV: 5676212-5676334

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C55C3.4.1 5676158 5678144 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon123511   177   IV: 5676158-5676334 Caenorhabditis elegans
Exon123512   108   IV: 5676380-5676487 Caenorhabditis elegans
Exon123513   285   IV: 5676539-5676823 Caenorhabditis elegans
Exon123514   234   IV: 5676874-5677107 Caenorhabditis elegans
Exon123515   375   IV: 5677412-5677786 Caenorhabditis elegans
Exon123516   105   IV: 5677836-5677940 Caenorhabditis elegans
Exon123517   158   IV: 5677987-5678144 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C55C3.4.1 5676158 5678144 -1

1 Sequence

Length
1442

1 Sequence Ontology Term

Identifier Name Description
transcript