WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C39H7.9a.1 Sequence Name  C39H7.9a.1
Length (nt)  1129   Chromosome Location  IV: 5615408-5619743
Chromosome . Primary Identifier  IV Chromosome Location . Start  5615408
Chromosome Location . End  5619743 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C39H7.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044125 srsx-16 C39H7.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C39H7.9a C39H7.9a 957   IV: 5615522-5615710

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C39H7.9a.1 5615408 5619743 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon123323   303   IV: 5615408-5615710 Caenorhabditis elegans
Exon123327   170   IV: 5616270-5616439 Caenorhabditis elegans
Exon123334   124   IV: 5618124-5618247 Caenorhabditis elegans
Exon123340   254   IV: 5618574-5618827 Caenorhabditis elegans
Exon123341   81   IV: 5619094-5619174 Caenorhabditis elegans
Exon123346   197   IV: 5619547-5619743 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C39H7.9a.1 5615408 5619743 -1

1 Sequence

Length
1129

1 Sequence Ontology Term

Identifier Name Description
transcript