WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y52D5A.2.1 Sequence Name  Y52D5A.2.1
Length (nt)  1745   Chromosome Location  IV: 5462446-5464503
Chromosome . Primary Identifier  IV Chromosome Location . Start  5462446
Chromosome Location . End  5464503 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y52D5A.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021793 Y52D5A.2 Y52D5A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y52D5A.2 Y52D5A.2 1635   IV: 5462501-5462752

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y52D5A.2.1 5462446 5464503 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon122710   307   IV: 5462446-5462752 Caenorhabditis elegans
Exon122711   132   IV: 5462802-5462933 Caenorhabditis elegans
Exon122712   456   IV: 5462991-5463446 Caenorhabditis elegans
Exon122713   381   IV: 5463505-5463885 Caenorhabditis elegans
Exon122714   216   IV: 5463941-5464156 Caenorhabditis elegans
Exon122715   132   IV: 5464207-5464338 Caenorhabditis elegans
Exon122716   121   IV: 5464383-5464503 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y52D5A.2.1 5462446 5464503 -1

1 Sequence

Length
1745

1 Sequence Ontology Term

Identifier Name Description
transcript