WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:AC7.2d.1 Sequence Name  AC7.2d.1
Length (nt)  1650   Chromosome Location  IV: 5127402-5149537
Chromosome . Primary Identifier  IV Chromosome Location . Start  5127402
Chromosome Location . End  5149537 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
AC7.2d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004929 soc-2 AC7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:AC7.2d AC7.2d 1650   IV: 5127402-5127622

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:AC7.2d.1 5127402 5149537 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon121454   221   IV: 5127402-5127622 Caenorhabditis elegans
Exon121461   351   IV: 5129027-5129377 Caenorhabditis elegans
Exon121467   220   IV: 5129749-5129968 Caenorhabditis elegans
Exon121471   203   IV: 5130433-5130635 Caenorhabditis elegans
Exon121476   217   IV: 5131299-5131515 Caenorhabditis elegans
Exon121481   153   IV: 5131763-5131915 Caenorhabditis elegans
Exon121485   132   IV: 5132105-5132236 Caenorhabditis elegans
Exon121526   138   IV: 5144715-5144852 Caenorhabditis elegans
Exon121533   15   IV: 5149523-5149537 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:AC7.2d.1 5127402 5149537 -1

1 Sequence

Length
1650

1 Sequence Ontology Term

Identifier Name Description
transcript